|   | UTILS DATABASE CREATION | 
Database installation
| Program name | Description | 
|---|---|
| aaindexextract | Extract data from AAINDEX | 
| cutgextract | Extract data from CUTG | 
| printsextract | Extract data from PRINTS | 
| prosextract | Build the PROSITE motif database for use by patmatmotifs | 
| rebaseextract | Extract data from REBASE | 
| tfextract | Extract data from TRANSFAC | 
| cathparse | Generates DCF file from raw CATH files | 
| domainnr | Removes redundant domains from a DCF file | 
| domainseqs | Adds sequence records to a DCF file | 
| domainsse | Add secondary structure records to a DCF file | 
| scopparse | Generate DCF file from raw SCOP files | 
| ssematch | Search a DCF file for secondary structure matches | 
| allversusall | Sequence similarity data from all-versus-all comparison | 
| seqnr | Removes redundancy from DHF files | 
| domainer | Generates domain CCF files from protein CCF files | 
| hetparse | Converts heterogen group dictionary to EMBL-like format | 
| pdbparse | Parses PDB files and writes protein CCF files | 
| pdbplus | Add accessibility & secondary structure to a CCF file | 
| pdbtosp | Convert swissprot:PDB codes file to EMBL-like format | 
| sites | Generate residue-ligand CON files from CCF files |